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gdc data
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2.8k
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r: vector memory exhausted (limit reached?)
TCGAbiolinks
Methylation
GDC data
Data prepare
4.3 years ago
ph.shimaasherif
• 0
0
votes
0
replies
925
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GDC RNA seq files (replicates?)
gdc data
TCGA
gdcdownload
5.3 years ago
coyoung
▴ 10
17
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8
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3.1k
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How to check the read length for all the TCGA data samples in GDC?
gdc
tcga
wes
gdc data
updated 6.1 years ago by
Sean Davis
21k • written 6.1 years ago by
Biologist
▴ 110
0
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0
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827
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Error in GDCprepare of TCGAbioloinks
TCGAbioloinks
GDC data
6.2 years ago
lawarde.ankita1
▴ 30
4 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
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